extensions
10.64.196.138: http://10.64.196.138 | Registrations | 10.64.196.138 |
185.176.42.164: http://185.176.42.164 | Registrations | 185.176.42.164 |
192.168.1.160: http://192.168.1.160 | Registrations | 192.168.1.160 |
192.168.3.3: http://192.168.3.3 | Registrations | 192.168.3.3 |
About | Basic page |
Tripal is a toolkit for construction of online biological (genetics, genomics, breeding, etc), community database, and is a member of the GMOD family of tools. Tripal provides by default integration with the GMOD Chado database schema and Drupal, a popular Content Management Systems (CMS). Tripal is licensed under the GNU General Public License version 2. Genomics, genetics, breeding and other biological data are increasingly complicated and time consuming to publish online for other researchers to search, browse and make discoveries. Tripal provides a framework to reduce the complexity of creating such a site, and provides access to a community of similar groups that share community-standards, and interact to address questions and learn best practices for sharing, storing and visualizing complex biological data. Objectives
Major Features
To Cite Tripal To Cite Tripal please use one of the following publications:
Brief History Tripal was first created in 2008 at the Clemson University Genomics Institute (CUGI) by Stephen Ficklin and Meg Staton to create a searchable annotated transcriptomic websites for the marine genomics and Fagaceae (hardwood) communities. It was created to help lower the total cost of development for these two communities, but with the goal to create a tool that could be re-used, was expandable, modular, provided support for social needs of a research community, did not force any particular look-and-feel and allowed for customizations as needed by the community. The first official release of Tripal occurred in 2009 and Tripal was soon added as a member of the Generic Model Organism Database (GMOD) organization suite of genome tools. Later, Tripal was adopted by Dorrie Main at Washington State University for the Genome Database for Rosaceae (GDR) and other community databases that she supported and by Kirstin Bett’s lab at the University of Saskatchewan for the KnowPulse database for pulse crop breeding and genetics. Lacey Sanderson-Kucheran of Dr. Bett's group provided major design and developmental support for Tripal. These two groups continued collaborative development of Tripal adding support for whole genome data, genetic data, publications, data for large-scale genotyping and phenotyping data, and data loaders for common formats. Currently, both groups continue active development, provide support to the community and are actively creating new resources. |
Accepting PAG Abstracts | Announcement | There will be a Tripal Workshop at the Plant and Animal Genome (PAG, http://www.intlpag.org/2016/) conference this coming Januray. The workshop is scheduled for: Sunday, January 10th, from 4:00 - 6:10pm. There are four open slots for speakers from the Tripal community. If you are interested in speaking, please email Dr. Meg Staton (mestato (at) gmail (dot) com) an abstract by October 16th. The organizers will select from the abstracts if more than 4 are submitted.
Please follow the same guidelines as those provided for PAG poster abstracts:
According to PAG guidelines the body of the abstract should be limited to 250 words. Please remember to include the author affiliations when you send your abstract.
Thanks so much and we are looking forward to seeing some of you in January!
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AeschynomeneBase: http://stage.aeschynomenebase.fr | Registrations | AeschynomeneBase |
Ag Data Survery | Announcement | Please see the message below from the Ag Data Curation folks at U. of Maryland. If you use agricultural data please consider filling out their survey or forwarding along to your user base! Greetings on behalf of the Agricultural Data Curation project at the University of Maryland College of Information Studies. We are studying the data practices of agricultural researchers in multiple settings. As part of our project, we are conducting a survey of these communities. |
Announcing the Tripal Hackathon | Announcement | |
Banana Genome Hub | Sites Using Tripal |