tripal_stock-administration.inc File Reference

Go to the source code of this file.

Functions
	tripal_stock_admin ()
	tripal_stock_admin_validate ($form, &$form_state)
	tripal_stock_sync_stocks ($organism_id, $job_id)
	tripal_stock_sync_stock_set ($organism_id, $job_id)
	get_tripal_stock_admin_form_cleanup_set (&$form)
	tripal_stock_cleanup ($dummy=NULL, $job_id=NULL)

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Detailed Description

Definition in file tripal_stock-administration.inc.

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Function Documentation

tripal_stock_sync_stocks	(	$	organism_id,
		$	job_id
	)

Sync stocks associated with a given organism or sync all stocks

Note: This is essentially an API function to make tripal stock sync act similar to other tripal modules

Parameters:

$organism_id	The ID of the organism to sync all stocks for
$job_id	The ID of the tripal job

Definition at line 187 of file tripal_stock-administration.inc.

                                                         {

  if ($organism_id) {
    return tripal_stock_sync_stock_set($organism_id, $job_id);
  }
  else {
    //get a list of all organisms and sync all stocks for all organisms
    $organisms = tripal_core_chado_select('organism', array('organism_id','genus','species','common_name'), array());
    foreach ($organisms as $o) {
      print "Syncing stocks associated with $o->genus $o->species ($o->common_name)\n";
      tripal_stock_sync_stock_set($o->organism_id, $job_id);
    }
  }

}