ND Genotypes Extension Module

This module provides a more specialized interface to genotypic information stored in the Chado Natural Diversity module tables including adding summaries of this information to feature pages and providing a powerful marker by germplasm matrix. The module adds specialized panes to marker and variant features to better display/summarize genotypic data. These include "Genotypes" pane with genotype distribution pie chart (HighCharts module needed), and "Sequences" pane which displays a region of the parent sequence for a marker with any known variants highlighted by their IUPAC wobble code to aid new marker design. The module also provides a search view displaying all the genotypes for a given stock in a marker (rows) by stock (columns) table. The user can indicate which stocks/germplasm they want to see and there is no set number of germplasm they can add.
Module Name: 
ND Genotypes
Drupal Project Name: 
nd_genotypes
Authors: 
Lacey Sanderson (Univ. Saskatchewan)
Compatible Chado version: 
Compatible Tripal Version: 
Development Stage: